Q1 · MEDICINE
Article
Author: Newman, Joseph V. ; Hentemann, Martin F. ; Hernandez-Juan, Felix A. ; Olivier, Nelson B. ; Read, Jon ; Gowers, Ian K. ; Sheppard, David W. ; Macritchie, Jacqueline A. ; Otterson, Linda G. ; Lazari, Ovadia ; Dumas, Jacques ; Geng, Bolin ; Green, Oluyinka M. ; Martínez-Botella, Gabriel ; Joseph-McCarthy, Diane ; Guler, Satenig ; Keating, Thomas A. ; Owens, Andrew P. ; Breen, John N. ; Larsen, Nicholas A. ; Duffy, James E. S. ; Loch, James T. ; Kawatkar, Sameer ; McKenzie, Andrew R.
Thymidylate kinase (TMK) is an essential enzyme in bacterial DNA synthesis. The deoxythymidine monophosphate (dTMP) substrate binding pocket was targeted in a rational-design, structure-supported effort, yielding a unique series of antibacterial agents showing a novel, induced-fit binding mode. Lead optimization, aided by X-ray crystallography, led to picomolar inhibitors of both Streptococcus pneumoniae and Staphylococcus aureus TMK. MICs < 1 μg/mL were achieved against methicillin-resistant S. aureus (MRSA), S. pneumoniae, and vancomycin-resistant Enterococcus (VRE). Log D adjustments yielded single diastereomers 14 (TK-666) and 46, showing a broad antibacterial spectrum against Gram-positive bacteria and excellent selectivity against the human thymidylate kinase ortholog.