Diabetic nephropathy (DN) is the leading cause of end-stage renal disease (ESRD) worldwide, underscoring the urgent need to explore effective strategies for its prevention and control. Accumulating evidence indicates that inhibition of abnormal mesangial cells (MCs) proliferation, particularly during the early stages of DN, represents a critical therapeutic strategy for attenuating the progression of DN. Complanatoside A (CA), a major flavonoid derived from Semen Astragali Complanati, has demonstrated significant reno-protective properties. In this study, diabetic mouse models and high-glucose (HG)-induced mouse mesangial cell models were established to investigate the reno-protective mechanisms of CA. Furthermore, network pharmacology was employed to predict molecular targets and signaling pathways. Histopathological analysis revealed that CA alleviated key renal pathological changes, including glomerular interstitial fibrosis, thickening of the glomerular basement membrane, mesangial matrix expansion, glomerulosclerosis, and fibrillar collagen deposition. Furthermore, CA inhibited HG-induced mesangial extracellular matrix (ECM) accumulation, inflammatory responses, and cellular proliferation. Through network pharmacology, eight core genes (TNF-α, AKT1, HSP90AA1, MMP9, PPARG, SRC, PTGS2, and MMP2) were identified as critical targets of CA in DN and were primarily associated with inflammatory responses and ECM deposition. Molecular docking analysis confirmed that CA exhibited high binding affinity for these inflammation- and ECM-related genes. This study demonstrated that CA effectively mitigated renal injury in DN by suppressing inflammatory pathways and ECM deposition, thus providing novel insights into its therapeutic potential. These findings offer new perspectives for the development of traditional Chinese medicine-based interventions for the treatment of DN.