HEXOSE TRANSPORTERS (HTs) mediate subcellular sugar transport, critically governing sugar distribution and accumulation in plants. However, studies focusing on the evolutionary pattern and systematic analysis of apple HT family are still sparse. Here, 29 MdHT genes were identified from Malus domestica genome GDDH13 v1.1. We systematically analyzed the evolutionary history of HT families across various plant lineages. These genes map to 9 chromosomes, with notable density on chromosome 13, reflecting expansion via whole-genome duplication (WGD)/segmental duplication and tandem duplication during domestication. RNA-seq analysis revealed divergent tissue-specific expression patterns for MdHTs in mature leaves, stem tips, and fruits. Notably, MdHT14.1 and MdHT14.2 exhibited high expression levels during fruit development, yet MdHT14.2 participated in a more complex co-expression network. Furthermore, transgenic apple calli and heterologous expression in defective yeast mutant demonstrated that MdHT14.2 can transport both glucose and fructose, but docking experiments showed differences with between MdHT14.2 and MdHT14.1 in their abilities to bind glucose. In addition, MdHT14.1 was found to be negatively correlated with cold stress tolerance in transgenic apple calli and tomato plants, potentially linked to increased reactive oxygen species (ROS) generation and diminished ROS scavenging capacity. This study provides new insights into the roles of MdHTs in regulating apple development and responses to cold stress.